Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944939.1_cds_XP_016487650.1_78363
CDS Infomation

[gene=LOC107807724] [db_xref=GeneID:107807724] [protein=UPF0481 protein At3g47200-like] [protein_id=XP_016487650.1] [location=complement(656..2158)] [gbkey=CDS]
Sequence

ATGGATAAACAATCTGCTAAAGGAACTAAGGTTACTAGAGAAGAAGGTTGGAACGTCGGT
AATGAAAAGTTTGCTGATATTAATCCAGAAGAATGGAGCATTACATTCCATCAAGAATCA
AACTCAACTTCTCATGAAATCAGTGAAAATGAGAGAAAATGGCTATGTTCTGTGGAGAAT
TCCCCTGCCATTGGCTCTTCTGAGAAGCCAAAGATACAGATGGTCCCCAAAATGCATCGC
GAGAATGAAGCAAACAGAAGGTGCTATGAGCCTCTTGTGGTCGCAATCGGTCCATTTCAC
CACGAAAAATCCAAGCTTCAACCTATGGAAAAGTACAAGGTATTACTGGCAAATCAGTTT
GCTAAAGAAAGTAGCAAAGAAAAATCAGTATCTATTGATGTGCTTTACACAAGGGTCAAG
GACATTGTGCCCAGTGCTAGGGACTGCTATGCTAAGGACTCAATTAAAGATTACAACGAC
GAGGAATTTGCAAAGATGATGTTCTTGGATGGCTGTTTCATTCTCCAATATATTCACTGC
CTTGTCACAAGAAACTATAAGCAGCTGCAGATGAAGAGCCATGATATAGCTTTCATTCGT
CGTGATCTTTTCTTACTTGAAAATCAGTTACCTTTTGAAGTCCTGCATGTGTTAATGAGC
TGTAGGTTCAAGAAAGATGAAGGAATGGAGATGATTAAAACGTTCATCTCGAGTGCACAT
GCAAAGCCTCTTCAAAGCCATGGATTAATTCAAAATATCAAGTATTTATTTCTTGATTTC
TTTGGCAAGATTTCTGAAAGAGAAAAGCCTTCCCTTACCCAAGAAGAAACCTCAAAAAAT
CAAATTCCTGCTCATCTCCTCGAGATATTAAGAGCACAACTCATAGACCCGAATGCTTTC
TCAGAAGGCGGATGCTATCTAAGGGGTGAGTGGTGCTCGTATCGTTCAGCTAGGGAGCTG
AGCAGAGCAGGAATCCATTTCGAGTGTGGAAAGAGACGTTGTCTTTCAGATATTAAGTTC
AATTCATTCCGTTTCTCAGCTCTTTTAACACTTCCACCTATAACCATAGATGATTCAACC
AAGTCGGAGCTATTAAACTTAGTTGCATACGAGGCATGCCCCGATACACCAGATGACTTT
GGAGTTACATCTTATCTTTGCCTGATGGATTCACTAATTGATCATGCTGAAGATGTGAAG
GAGCTGAGATCAAAAGGTATACTATTAAACTTTCTTGGAAGTGATCAAGAAGTAGCAAAT
CTCTTCAATGAGATAGCAACAGATTTGGTGCCAAATCCTCATGCCTTTATTGATGTGAAA
CACAAAATTGAGAATCATTACAATAACAAAGGAAAAGTATGGGTTGCTGAGTGGAAAAAC
ACTCATTTTGATAGCCCATGGACTGTTGTTGCATTTATTGCAGCAATTTTTCTCATTCTT
TTACAAGTAGCTGATACAGTTCTAGCAGCTTTCCAGGTCAAATTTGCAGAACCACCAAAA
TAA

Peptide Sequence

PEP ID

XP_016487650.1
PEP Infomation

PREDICTED: UPF0481 protein At3g47200-like [Nicotiana tabacum]
Sequence

MDKQSAKGTKVTREEGWNVGNEKFADINPEEWSITFHQESNSTSHEISENERKWLCSVEN
SPAIGSSEKPKIQMVPKMHRENEANRRCYEPLVVAIGPFHHEKSKLQPMEKYKVLLANQF
AKESSKEKSVSIDVLYTRVKDIVPSARDCYAKDSIKDYNDEEFAKMMFLDGCFILQYIHC
LVTRNYKQLQMKSHDIAFIRRDLFLLENQLPFEVLHVLMSCRFKKDEGMEMIKTFISSAH
AKPLQSHGLIQNIKYLFLDFFGKISEREKPSLTQEETSKNQIPAHLLEILRAQLIDPNAF
SEGGCYLRGEWCSYRSARELSRAGIHFECGKRRCLSDIKFNSFRFSALLTLPPITIDDST
KSELLNLVAYEACPDTPDDFGVTSYLCLMDSLIDHAEDVKELRSKGILLNFLGSDQEVAN
LFNEIATDLVPNPHAFIDVKHKIENHYNNKGKVWVAEWKNTHFDSPWTVVAFIAAIFLIL
LQVADTVLAAFQVKFAEPPK

Transcript Sequence

Gene sequence data has not been registered.